SeedExtractor is designed to determine seed size and shape (including area, perimeter, length, width, circularity, and centroid), and seed color with capability to process a large number of images in a time-efficient.

SeedExtractor is a MATLAB-based application, which makes it compatible with multiple operating systems. The tool is available in two formats: Regular and Standalone. Both these versions are identical in their interface and performance.

MATLAB Regular Application: requires a MATLAB license for its operation.
MATLAB Standalone Application: uses MATLAB Compiler Runtime and does not necessarily require MATLAB license for its operation.

Main user interface operations:

Type file path
Change parameters
Execute for all images

Path should be a regular expression for the image files. * can be used to represent characters (e.g. C:\*\Vis_SV_*\*.png).

H1,H2,S1,S2,V1,V2 correspond to ranges of HSV values.

SeedExtractor: An Open-Source GUI for Seed Image Analysis Feiyu Zhu, Puneet Paul, Waseem Hussain, Kyle Wallman, Balpreet K. Dhatt, Jaspreet Sandhu, Larissa Irvin, Gota Morota, Hongfeng Yu, Harkamal Walia. Frontiers in Plant Science, vol 11 (2021): 2227.
DOI: https://doi.org/10.3389/fpls.2020.581546 [PAPER]

@article{zhu2021seedextractor,
  title={SeedExtractor: an open-source GUI for seed image analysis},
  author={Zhu, Feiyu and Paul, Puneet and Hussain, Waseem and Wallman, Kyle and 
 Dhatt, Balpreet K and Sandhu, Jaspreet and Irvin, Larissa and Morota, Gota and 
 Yu, Hongfeng and Walia, Harkamal},
  journal={Frontiers in plant science},
  volume={11},
  pages={581546},
  year={2021},
  publisher={Frontiers Media SA}
}